BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011A04SP1|AL426131
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1310 1523 0.0
>3x_Contig1310
Length = 7790
Score = 1523 bits (767), Expect = 0.0
Identities = 783/787 (99%), Gaps = 2/787 (0%)
Strand = Plus / Minus
Query: 1 gatctttgatctgttctgtatctagtggcaaaatgttgggcaattcctttatagcatact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4043 gatctttgatctgttctgtatctagtggcaaaatgttgggcaattcctttatagcatact 3984
Query: 61 caatagcatcctctttcgtcattgtgactgttttggcaatattattccagtgctatgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3983 caatagcatcctctttcgtcattgtgactgttttggcaatattattccagtgctatgtat 3924
Query: 121 atccttttactgtgttgtttggatacgagtagttactttctcagttgctaaggctcatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3923 atccttttactgtgttgtttggatacgagtagttactttctcagttgctaaggctcatct 3864
Query: 181 ctcaatattagactttttcactttaaaagatgagagttctcaagttatgaaagaaaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3863 ctcaatattagactttttcactttaaaagatgagagttctcaagttatgaaagaaaaggt 3804
Query: 241 ggaaccgantcagccaacaagaggtctattgtaacaattgggtggctgtccaggtgatct 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3803 ggaaccga-tcagccaacaagaggtctattgtaacaattgggtggctgtccaggtgatct 3745
Query: 301 catgaagaatcatagactcgagaacttggatcgaaagtagcagcttcggaagctttactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3744 catgaagaatcatagactcgagaacttggatcgaaagtagcagcttcggaagctttactg 3685
Query: 361 tcaaatggttgttaacgtcacattatcttggactgacagacattaatacccgaacctttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3684 tcaaatggttgttaacgtcacattatcttggactgacagacattaatacccgaacctttc 3625
Query: 421 tataactatatataaatctaaacggtatagttactgctggtgccacagcccagaagctgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3624 tataactatatataaatctaaacggtatagttactgctggtgccacagcccagaagctgg 3565
Query: 481 gtactactctaagtaaccgaagttcctggatattgacacttattaagcagtgcagtgagt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3564 gtactactctaagtaaccgaagttcctggatattgacacttattaagcagtgcagtgagt 3505
Query: 541 aggacgagctgcatgggcaagatgagcagtatattgcttataagttcgactcaaaagatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3504 aggacgagctgcatgggcaagatgagcagtatattgcttataagttcgactcaaaagatc 3445
Query: 601 ccacttggatgaacagatttacatttcatataaactgattctcgactaggcaatatacac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3444 ccacttggatgaacagatttacatttcatataaactgattctcgactaggcaatatacac 3385
Query: 661 catgaagggccccaaatatctgcmacatgcttgtctggtcaacgatatcttacctggtaa 720
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3384 catgaagggccccaaatatctgcaacatgcttgtctggtcaacgatatcttacctggtaa 3325
Query: 721 aaccctaaatcaattataatagtagagacgtatgtbcggggtaatctttccgatcaatag 780
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 3324 aaccctaaatcaattataatagtagagacgtatgtcc-gggtaatctttccgatcaatag 3266
Query: 781 tataaaa 787
|||||||
Sbjct: 3265 tataaaa 3259
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4919
Number of Sequences: 1807
Number of extensions: 4919
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 787
length of database: 10,358,551
effective HSP length: 16
effective length of query: 771
effective length of database: 10,329,639
effective search space: 7964151669
effective search space used: 7964151669
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)